STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1WUN4Uncharacterized protein. (2052 aa)    
Predicted Functional Partners:
A0A2K2AKQ2
Uncharacterized protein.
    
 0.728
B9GS16_POPTR
Uncharacterized protein.
    
 0.728
B9GUG6_POPTR
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.552
B9H794_POPTR
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.552
A0A2K1WWV8
Uncharacterized protein.
  
     0.459
A0A2K2A8C9
Uncharacterized protein.
  
     0.453
A0A3N7EGC3
Uncharacterized protein.
  
     0.431
U5G333_POPTR
Uncharacterized protein.
  
     0.425
A0A2K2A2B4
Uncharacterized protein.
  
     0.424
A0A2K1YPA7
Uncharacterized protein.
  
     0.421
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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