Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1XAV8Protein kinase domain-containing protein. (541 aa)    
Predicted Functional Partners:
A0A2K1X851
J domain-containing protein.
    
 
 0.761
A9P7Y5_POPTR
J domain-containing protein.
    
 
 0.761
A0A2K1Z349
Uncharacterized protein.
    
 
 0.755
A9PDU6_POPTR
Uncharacterized protein.
    
 
 0.755
A9P9P6_POPTR
Uncharacterized protein.
   
 
 0.662
A9P9W3_POPTR
Uncharacterized protein.
   
 
 0.662
B9GJU8_POPTR
Uncharacterized protein.
   
 
 0.662
POPTR_T042800
Uncharacterized protein.
   
 
 0.662
A9P8R8_POPTR
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.592
A9P911_POPTR
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.592
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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