STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1XDX1Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
B9HX20_POPTR
WAK_assoc domain-containing protein.
  
 
   0.483
B9GGE8_POPTR
Uncharacterized protein.
  
     0.465
A0A2K1XAG1
Uncharacterized protein.
  
     0.463
A0A2K1XAG7
Uncharacterized protein.
  
     0.453
A0A2K1XAF1
Uncharacterized protein.
  
     0.440
A0A2K1ZWL4
Uncharacterized protein.
  
     0.439
A0A2K1XAE9
Uncharacterized protein.
  
     0.428
A0A2K1XAF5
Uncharacterized protein.
  
     0.424
A0A2K1XAD5
Uncharacterized protein.
  
     0.422
A0A2K1ZWN5
Uncharacterized protein.
  
     0.422
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.