STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1XLX1Gb3_synth domain-containing protein. (704 aa)    
Predicted Functional Partners:
A0A3N7FXV3
EGF-like domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.563
B9I2J0_POPTR
Uncharacterized protein.
      
 0.563
A0A2K1XDE9
DYW_deaminase domain-containing protein.
      
 0.558
B9MXK7_POPTR
Glycos_transf_1 domain-containing protein.
      
 0.529
A0A2K2AZB3
Uncharacterized protein.
      
 0.514
A0A2K2BEM5
Glyco_transf_28 domain-containing protein.
      
 0.513
A0A2K1YRP7
HTH myb-type domain-containing protein.
    
 0.495
A0A2K1ZH30
HTH myb-type domain-containing protein.
    
 0.495
B9HMH7_POPTR
Glyco_trans_2-like domain-containing protein.
      
 0.493
B9HTI9_POPTR
Glyco_trans_2-like domain-containing protein.
      
 0.493
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.