STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1YFL2Uncharacterized protein. (1384 aa)    
Predicted Functional Partners:
A0A2K1YXB5
Uncharacterized protein; Belongs to the actin family.
    
 0.801
A0A2K1Z2G5
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.735
B9GIV9_POPTR
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.735
A0A2K1ZK56
Uncharacterized protein.
  
0.720
A0A2K1XIB9
Uncharacterized protein; Belongs to the actin family.
   
 0.714
A0A2K1Y9P6
Uncharacterized protein; Belongs to the actin family.
   
 0.714
A0A2K2AM03
Uncharacterized protein.
    
 0.678
A0A3N7EHZ4
Uncharacterized protein.
    
 0.678
B9N5K1_POPTR
Uncharacterized protein.
    
 0.678
U5FIP3_POPTR
Uncharacterized protein.
    
 0.678
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.