STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1ZJD8Uncharacterized protein; Belongs to the peptidase C1 family. (358 aa)    
Predicted Functional Partners:
A0A2K1YBF9
Uncharacterized protein.
    
  0.805
B9IF98_POPTR
Uncharacterized protein.
    
  0.805
B9GH97_POPTR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.651
B9H6L4_POPTR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.651
B9N2J4_POPTR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.651
U7E1R7_POPTR
Adenosine/AMP deaminase family protein.
   
  
 0.633
A0A2K2C9Q5
Uncharacterized protein.
      
 0.620
B9GFZ5_POPTR
Uncharacterized protein.
      
 0.620
A0A2K1ZDQ3
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
      
 0.616
A0A2K2BTX3
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
      
 0.616
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.