STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1ZKP6CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (196 aa)    
Predicted Functional Partners:
B9HIX7_POPTR
Uncharacterized protein.
  
     0.501
A0A3N7H991
Bulb-type lectin domain-containing protein.
  
     0.490
A0A3N7FRK8
Uncharacterized protein.
  
     0.489
B9HWH5_POPTR
Uncharacterized protein.
  
     0.485
B9GNE2_POPTR
Cystatin domain-containing protein; Belongs to the cystatin family.
  
     0.482
A0A2K1YMJ2
Bulb-type lectin domain-containing protein.
  
     0.481
A0A2K2AR18
Uncharacterized protein.
  
     0.479
B9HJ31_POPTR
Uncharacterized protein.
  
     0.478
A0A2K2CBR3
Apple domain-containing protein.
  
     0.476
A0A3N7FQ08
EGF-like domain-containing protein.
  
     0.468
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.