STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K1ZZ96BHLH domain-containing protein. (708 aa)    
Predicted Functional Partners:
B9H536_POPTR
VQ domain-containing protein.
  
 
   0.500
B9HFH4_POPTR
VQ domain-containing protein.
  
 
   0.493
B9H9E3_POPTR
FLZ-type domain-containing protein.
  
     0.477
A0A2K2CBQ9
BHLH domain-containing protein.
  
     0.476
B9HJJ4_POPTR
C2H2-type domain-containing protein.
  
     0.476
A0A2K2BND6
BHLH family protein.
  
   
 0.473
B9IAB6_POPTR
BHLH domain-containing protein.
  
   
 0.471
B9HVS1_POPTR
C2H2-type domain-containing protein.
  
     0.466
A0A2K1XDM5
C2H2-type domain-containing protein.
  
     0.464
A0A2K2AP17
BHLH domain-containing protein.
  
     0.464
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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