STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2A5A4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (948 aa)    
Predicted Functional Partners:
A0A2K1X5P7
Malectin_like domain-containing protein.
    
 0.727
A0A3N7H3H4
Malectin_like domain-containing protein.
    
 0.727
A9PAL4_POPTR
Uncharacterized protein; Belongs to the expansin family.
    
 0.648
B9HQZ5_POPTR
Uncharacterized protein; Belongs to the expansin family.
    
 0.648
POPTR_T113300
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.642
A0A2K1XHW7
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.642
B9HWH2_POPTR
C2H2-type domain-containing protein.
      
 0.627
A0A2K1X5S3
COBRA-like protein; Belongs to the COBRA family.
      
 0.620
A0A2K1X5T8
COBRA-like protein; Belongs to the COBRA family.
      
 0.620
A9P983_POPTR
COBRA-like protein; Belongs to the COBRA family.
      
 0.620
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.