STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2ABN2Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
B9GSM4_POPTR
Nkap_C domain-containing protein.
    
  0.746
B9H897_POPTR
Nkap_C domain-containing protein.
    
  0.746
B9HY36_POPTR
Uncharacterized protein.
   
 0.710
B9HJ06_POPTR
Uncharacterized protein.
  
 0.707
A0A2K2BK57
Ubiquitin-like domain-containing protein.
     
 0.693
U5FT83_POPTR
Ubiquitin-like domain-containing protein.
     
 0.693
A0A2K1Z5I6
Uncharacterized protein.
  
  
  0.672
B9IIR7_POPTR
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.666
B9I2N4_POPTR
SURP motif domain-containing protein.
   
 
  0.638
A0A2K2BRJ0
Uncharacterized protein.
  
 0.631
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.