A0A2K2ADM2 protein (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2K2ADM2

Uncharacterized protein. (202 aa)

Predicted Functional Partners:

B9HS51_POPTR

0.556

A0A2K2BSA7

0.521

B9MUL9_POPTR

0.517

POPTR_T170400

0.491

A0A2K1XGK0

0.487

A0A2K1Z4R0

0.486

A0A3N7FAG3

0.484

A0A2K1XWC9

0.481

B9HUP3_POPTR

0.479

A9PFE3_POPTR

0.473

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XGK0	A0A2K1XWC9	A0A2K1XGK0	A0A2K1XWC9	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A2K1XGK0	A0A2K2ADM2	A0A2K1XGK0	A0A2K2ADM2	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A2K1XGK0	A0A2K2BSA7	A0A2K1XGK0	A0A2K2BSA7	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A2K1XGK0	B9MUL9_POPTR	A0A2K1XGK0	B9MUL9	Uncharacterized protein.	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family.	0.444
A0A2K1XWC9	A0A2K1XGK0	A0A2K1XWC9	A0A2K1XGK0	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A2K1XWC9	A0A2K1Z4R0	A0A2K1XWC9	A0A2K1Z4R0	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A2K1XWC9	A0A2K2ADM2	A0A2K1XWC9	A0A2K2ADM2	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A2K1XWC9	A0A2K2BSA7	A0A2K1XWC9	A0A2K2BSA7	Uncharacterized protein.	Uncharacterized protein.	0.526
A0A2K1XWC9	B9HUP3_POPTR	A0A2K1XWC9	B9HUP3	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A2K1XWC9	B9MUL9_POPTR	A0A2K1XWC9	B9MUL9	Uncharacterized protein.	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family.	0.491
A0A2K1XWC9	POPTR_T170400	A0A2K1XWC9	A0A3N7FJE8	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A2K1Z4R0	A0A2K1XWC9	A0A2K1Z4R0	A0A2K1XWC9	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A2K1Z4R0	A0A2K2ADM2	A0A2K1Z4R0	A0A2K2ADM2	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A2K1Z4R0	A0A2K2BSA7	A0A2K1Z4R0	A0A2K2BSA7	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A2K1Z4R0	B9HUP3_POPTR	A0A2K1Z4R0	B9HUP3	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A2K1Z4R0	B9MUL9_POPTR	A0A2K1Z4R0	B9MUL9	Uncharacterized protein.	Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family.	0.467
A0A2K2ADM2	A0A2K1XGK0	A0A2K2ADM2	A0A2K1XGK0	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A2K2ADM2	A0A2K1XWC9	A0A2K2ADM2	A0A2K1XWC9	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A2K2ADM2	A0A2K1Z4R0	A0A2K2ADM2	A0A2K1Z4R0	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A2K2ADM2	A0A2K2BSA7	A0A2K2ADM2	A0A2K2BSA7	Uncharacterized protein.	Uncharacterized protein.	0.521

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2023

Credits

Access

Info

About