STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2AE11Uncharacterized protein; Belongs to the cytochrome P450 family. (578 aa)    
Predicted Functional Partners:
A0A2K1ZAJ4
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
 
0.919
B9H1E5_POPTR
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
0.918
A0A2K2B179
Uncharacterized protein.
     
 0.911
U5GQK9_POPTR
GMC_OxRdtase_N domain-containing protein.
     
 0.911
A9PDL9_POPTR
S5A_REDUCTASE domain-containing protein.
    
  0.810
B9HTJ3_POPTR
S5A_REDUCTASE domain-containing protein.
    
  0.810
B9I8I7_POPTR
Cyclic nucleotide-binding domain-containing protein.
     
  0.800
U5GMY6_POPTR
Glycerol-3-phosphate acyltransferase, chloroplastic; Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids. Belongs to the GPAT/DAPAT family.
    
 0.709
B9HST3_POPTR
Uncharacterized protein.
     
 0.700
A0A2K1ZGM7
Uncharacterized protein.
     
 0.681
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.