Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2AG61Protein kinase domain-containing protein. (702 aa)    
Predicted Functional Partners:
A0A2K1WZ89
Ubiquitin-like domain-containing protein.
    
 
 0.613
A0A2K2A4E1
Ubiquitin-like domain-containing protein.
    
 
 0.613
A9PAG1_POPTR
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.532
A9PD53_POPTR
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.532
A0A2K1XTE1
Uncharacterized protein.
    
 
 0.524
A0A2K1ZTA2
Methyltransferase.
    
 
 0.507
A0A2K1WNY8
Uncharacterized protein.
      
 0.480
A0A3N7EXB5
Uncharacterized protein.
      
 0.480
A9P890_POPTR
Uncharacterized protein.
      
 0.480
A9PBQ1_POPTR
Uncharacterized protein.
      
 0.480
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (22%) [HD]