STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2APD1Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
B9GWJ0_POPTR
DUF295 domain-containing protein.
  
 
  0.581
A0A2K1ZV34
DUF4220 domain-containing protein.
  
 
  0.540
A0A2K1ZV71
DUF4220 domain-containing protein.
  
 
  0.538
A0A2K1XL86
DUF4220 domain-containing protein.
  
 
  0.537
A0A2K1XLL1
DUF4220 domain-containing protein.
  
 
  0.537
A0A2K1XLM8
DUF4220 domain-containing protein.
  
 
  0.537
B9NDP2_POPTR
Uncharacterized protein.
  
 
  0.537
A0A2K1ZV33
DUF4220 domain-containing protein.
  
 
  0.536
A0A3N7F0P1
DUF4220 domain-containing protein.
  
 
  0.536
A0A3N7FMD6
DUF4220 domain-containing protein.
  
 
  0.536
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (16%) [HD]