STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2B1A6NAD_binding_11 domain-containing protein. (111 aa)    
Predicted Functional Partners:
A0A2K2C4T8
Uncharacterized protein.
   
 0.763
B9IGJ9_POPTR
Uncharacterized protein.
   
 0.719
A0A2K1YRY7
Uncharacterized protein.
    
 0.689
A0A2K2AZC1
Beta-Casp domain-containing protein.
    
 0.668
A0A2K1WZP6
Uncharacterized protein.
   
 0.655
A0A2K1WZU0
Uncharacterized protein.
   
 0.655
B9H5K4_POPTR
RPOL4c domain-containing protein.
   
  0.602
A0A2K1Z5I7
RPOLD domain-containing protein.
    
  0.584
B9IJU1_POPTR
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.578
A9PF10_POPTR
Uncharacterized protein.
    
  0.544
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.