Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2BAY4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (382 aa)    
Predicted Functional Partners:
A0A2K1XPG3
NAC domain-containing protein.
      
 0.522
A0A2K1ZW63
PsbP domain-containing protein.
      
 0.511
U5FKK6_POPTR
Uncharacterized protein.
      
 0.449
A0A3N7HZ67
Protein kinase domain-containing protein.
  
 
  0.442
B9H940_POPTR
Protein kinase domain-containing protein.
  
  0.413
B9H6E4_POPTR
Protein kinase domain-containing protein.
  
  0.411
U5G2Q7_POPTR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  0.410
B9IHQ0_POPTR
Protein kinase domain-containing protein.
  
  0.407
A0A2K2BKF0
Uncharacterized protein.
  
  0.406
A0A2K1YQ93
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  0.405
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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