STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2BJT0Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
A0A2K2C9R1
Uncharacterized protein.
    
 0.542
B9IK24_POPTR
Uncharacterized protein.
  
     0.485
A0A2K1ZPR3
Uncharacterized protein.
  
     0.483
A0A2K1YVF8
Uncharacterized protein.
    
 0.477
A0A2K2C819
SGF29 C-terminal domain-containing protein.
    
 0.477
A0A2K1XD11
Uncharacterized protein.
  
     0.475
U5FR69_POPTR
Uncharacterized protein; Belongs to the adenylate kinase family.
      
 0.473
B9MVL2_POPTR
Uncharacterized protein.
  
     0.460
A0A2K2A1C3
Uncharacterized protein.
  
     0.451
A0A2K2BQL8
PEROXIDASE_4 domain-containing protein.
  
 
  0.449
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.