STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
A0A2K2BTX3CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (607 aa)    
Predicted Functional Partners:
B9H8W6_POPTR
Uncharacterized protein.
    
  0.900
B9GWS1_POPTR
Uncharacterized protein.
  
 
 0.874
A9PAF2_POPTR
Nucleoside diphosphate kinase.
  
 
 0.849
A9PC44_POPTR
Nucleoside diphosphate kinase.
  
 
 0.849
A9PEY9_POPTR
Nucleoside diphosphate kinase.
  
 
 0.849
NDPK2
Nucleoside diphosphate kinase.
  
 
 0.849
U7E1R7_POPTR
Adenosine/AMP deaminase family protein.
  
  
 0.824
A9PBE6_POPTR
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.816
A0A2K1ZCM0
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.807
B9HT60_POPTR
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 0.807
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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