Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A2K2C335Protein kinase domain-containing protein. (488 aa)    
Predicted Functional Partners:
A0A2K2B0E0
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.751
U5GUT9_POPTR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.751
A0A2K1WPH6
Uncharacterized protein.
  
 
 0.681
A0A3N7F2H4
Uncharacterized protein.
   
 0.601
A0A3N7G6G5
Uncharacterized protein.
    
 0.585
A0A2K1ZGJ8
Uncharacterized protein.
    
  0.486
A0A3N7FLL4
Uncharacterized protein.
    
  0.486
A0A2K1YC61
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.482
B9ICE4_POPTR
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.482
B9I0B5_POPTR
ETF domain-containing protein.
  
 
 0.477
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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