Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2CBG8Protein kinase domain-containing protein. (847 aa)    
Predicted Functional Partners:
U7DZ80_POPTR
Uncharacterized protein.
   
 
 0.558
A0A3N7FZA2
Uncharacterized protein.
      
 0.545
A0A2K1Z6D3
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 0.531
B9H0Q2_POPTR
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 0.531
A9PAC7_POPTR
Uncharacterized protein.
  
   
 0.529
A9PB44_POPTR
Uncharacterized protein.
  
   
 0.526
A0A2K1YQ42
Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation.
    
 0.525
B9HKS3_POPTR
Long-chain-alcohol oxidase; Long-chain fatty alcohol oxidase involved in the omega- oxidation pathway of lipid degradation.
    
 0.525
U5GQP4_POPTR
Uncharacterized protein.
    
 0.525
U5GGG0_POPTR
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.507
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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