STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N7ES82Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
B9I7Y5_POPTR
Glyco_tran_28_C domain-containing protein.
   
 0.993
B9MZT0_POPTR
Glyco_tran_28_C domain-containing protein.
   
 0.993
B9H9H4_POPTR
Uncharacterized protein.
    
 0.964
B9IHW0_POPTR
Uncharacterized protein.
    
 0.964
U5GT32_POPTR
Glyco_trans_4-like_N domain-containing protein.
   
 
 0.961
A0A2K2C8Q2
Uncharacterized protein.
     
 
0.900
B9GQ13_POPTR
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
   
 
 0.618
B9H5H4_POPTR
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
   
 
 0.618
B9HMH7_POPTR
Glyco_trans_2-like domain-containing protein.
   
 
 0.582
B9HTI9_POPTR
Glyco_trans_2-like domain-containing protein.
   
 
 0.582
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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