STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N7F4M8Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
A0A2K2BUS9
Lipase_3 domain-containing protein.
  
     0.527
A0A3N7EVU8
Lipase_3 domain-containing protein.
  
     0.527
A0A2K1Y624
Uncharacterized protein.
  
     0.525
B9H832_POPTR
Uncharacterized protein.
  
     0.520
B9HNJ1_POPTR
Phytocyanin domain-containing protein.
  
     0.519
A0A2K1XER1
Uncharacterized protein.
  
     0.516
B9HD99_POPTR
ACT domain-containing protein.
  
     0.516
A0A2K2BE40
Uncharacterized protein.
  
     0.515
B9HIX7_POPTR
Uncharacterized protein.
  
     0.515
B9MXF6_POPTR
Uncharacterized protein.
  
     0.514
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.