STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_T102501Uncharacterized protein. (166 aa)    
Predicted Functional Partners:
B9N2X9_POPTR
LOB domain-containing protein.
  
     0.485
A0A3N7FLW6
LOB domain-containing protein.
  
     0.478
A0A2K2B189
LOB domain-containing protein.
  
     0.476
A0A2K1X238
Uncharacterized protein.
  
  
  0.468
A0A3N7EBC3
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
  
 
  0.457
U5G1Z0_POPTR
Uncharacterized protein.
  
     0.450
A0A2K1ZEB3
Uncharacterized protein.
  
     0.437
B9I2L3_POPTR
Uncharacterized protein.
  
     0.434
B9IE41_POPTR
Uncharacterized protein.
  
     0.425
A0A2K1X413
C2H2-type domain-containing protein.
  
     0.423
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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