STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_T169800Exocyst subunit Exo70 family protein; Component of the exocyst complex. (725 aa)    
Predicted Functional Partners:
A0A2K2AIZ0
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
   
 0.894
B9GTJ6_POPTR
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
   
 0.894
A0A2K1YYS4
Sec8_exocyst domain-containing protein.
   
 0.887
A0A2K1ZB44
Sec8_exocyst domain-containing protein.
   
 0.887
A0A2K1WRR2
Uncharacterized protein.
   
 0.878
A0A2K1Y4K1
Uncharacterized protein.
   
 0.878
A0A2K1XQ51
Sec3-PIP2_bind domain-containing protein.
    
 0.875
B9GP11_POPTR
Sec3-PIP2_bind domain-containing protein.
    
 0.875
B9GQD4_POPTR
Uncharacterized protein.
    
 0.849
B9I8Q0_POPTR
Uncharacterized protein.
    
 0.849
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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