STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3N7G1D4Uncharacterized protein. (74 aa)    
Predicted Functional Partners:
B9H670_POPTR
RRM domain-containing protein.
   
 0.707
A0A2K2C302
PWI domain-containing protein.
   
 0.626
B9GJ86_POPTR
PWI domain-containing protein.
   
 0.626
B9HPD0_POPTR
PWI domain-containing protein.
   
 0.626
A0A2K2BG77
RRM domain-containing protein.
   
 0.625
A0A3N7EUI6
RRM domain-containing protein.
   
 0.625
B9H737_POPTR
RRM domain-containing protein.
   
 0.625
POPTR_T125700
RRM domain-containing protein.
   
 0.625
B9HY36_POPTR
Uncharacterized protein.
    
  0.618
B9I2T5_POPTR
Slu7 domain-containing protein.
     
 0.614
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.