Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2K2A715 | A0A3N7G3Z9 | A0A2K2A715 | A0A3N7G3Z9 | Cwf21 domain-containing protein. | F-box domain-containing protein. | 0.790 |
A0A2K2A715 | A9PIB0_POPTR | A0A2K2A715 | A9PIB0 | Cwf21 domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.612 |
A0A2K2A715 | B9GQ12_POPTR | A0A2K2A715 | B9GQ12 | Cwf21 domain-containing protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.958 |
A0A2K2A715 | B9GWP7_POPTR | A0A2K2A715 | B9GWP7 | Cwf21 domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.820 |
A0A2K2A715 | U5FMG8_POPTR | A0A2K2A715 | U5FMG8 | Cwf21 domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.612 |
A0A2K2C914 | A0A3N7FUK3 | A0A2K2C914 | A0A3N7FUK3 | Uncharacterized protein. | Uncharacterized protein. | 0.954 |
A0A2K2C914 | A0A3N7FYQ7 | A0A2K2C914 | A0A3N7FYQ7 | Uncharacterized protein. | Uncharacterized protein. | 0.684 |
A0A2K2C914 | A0A3N7G3Z9 | A0A2K2C914 | A0A3N7G3Z9 | Uncharacterized protein. | F-box domain-containing protein. | 0.841 |
A0A2K2C914 | A9PIB0_POPTR | A0A2K2C914 | A9PIB0 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.634 |
A0A2K2C914 | B9HP11_POPTR | A0A2K2C914 | B9HP11 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.684 |
A0A2K2C914 | B9IJS7_POPTR | A0A2K2C914 | B9IJS7 | Uncharacterized protein. | Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. | 0.985 |
A0A2K2C914 | U5FMG8_POPTR | A0A2K2C914 | U5FMG8 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.634 |
A0A3N7FUK3 | A0A2K2C914 | A0A3N7FUK3 | A0A2K2C914 | Uncharacterized protein. | Uncharacterized protein. | 0.954 |
A0A3N7FUK3 | A0A3N7FYQ7 | A0A3N7FUK3 | A0A3N7FYQ7 | Uncharacterized protein. | Uncharacterized protein. | 0.684 |
A0A3N7FUK3 | A0A3N7G3Z9 | A0A3N7FUK3 | A0A3N7G3Z9 | Uncharacterized protein. | F-box domain-containing protein. | 0.841 |
A0A3N7FUK3 | A9PIB0_POPTR | A0A3N7FUK3 | A9PIB0 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.634 |
A0A3N7FUK3 | B9HP11_POPTR | A0A3N7FUK3 | B9HP11 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.684 |
A0A3N7FUK3 | B9IJS7_POPTR | A0A3N7FUK3 | B9IJS7 | Uncharacterized protein. | Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. | 0.985 |
A0A3N7FUK3 | U5FMG8_POPTR | A0A3N7FUK3 | U5FMG8 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.634 |
A0A3N7FYQ7 | A0A2K2C914 | A0A3N7FYQ7 | A0A2K2C914 | Uncharacterized protein. | Uncharacterized protein. | 0.684 |
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