STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A9P9B8_POPTRDynein light chain. (120 aa)    
Predicted Functional Partners:
A9P810_POPTR
Uncharacterized protein.
    
 0.700
A9P886_POPTR
Uncharacterized protein.
    
 0.700
A9P8T6_POPTR
Uncharacterized protein.
    
 0.700
A0A2K2B2Q5
Nucleoside diphosphate kinase.
    
   0.676
A0A2K2AJC5
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.664
A0A2K2A264
Uncharacterized protein; Belongs to the actin family.
    
 0.663
A0A3N7G806
Uncharacterized protein; Belongs to the actin family.
    
 0.663
A4ZSZ4_POPTR
Actin.
    
 0.663
B9GGS0_POPTR
Uncharacterized protein.
    
 0.663
B9GJJ1_POPTR
Uncharacterized protein.
    
 0.663
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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