STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9GHY7_POPTRChloride channel protein. (779 aa)    
Predicted Functional Partners:
A0A2K1XCC3
PX domain-containing protein.
      
 0.787
A0A2K2A5K6
PX domain-containing protein.
      
 0.787
A0A2K1YR62
Chloride channel protein.
  
 
 
 0.647
A0A2K1ZXS8
Uncharacterized protein; Belongs to the chloride channel (TC 2.A.49) family.
  
 
 
 0.639
U7E1A6_POPTR
Chloride channel-like family protein; Belongs to the chloride channel (TC 2.A.49) family.
  
 
 
 0.636
POPTR_T046200
Uncharacterized protein; Belongs to the chloride channel (TC 2.A.49) family.
  
 
 
 0.601
A0A2K2AYW0
Chloride channel protein.
  
 
 
 0.599
A0A2K2AZG0
Chloride channel protein.
  
 
 
 0.588
B9GJS4_POPTR
Uncharacterized protein; Belongs to the chloride channel (TC 2.A.49) family.
    
 
 0.564
A0A2K2B765
Uncharacterized protein.
    
 
 0.556
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.