STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9GML9_POPTRUncharacterized protein. (170 aa)    
Predicted Functional Partners:
A9PIC2_POPTR
Uncharacterized protein.
  
     0.493
POPTR_T088800
Uncharacterized protein.
  
     0.489
A0A2K2B2D6
Uncharacterized protein.
  
     0.481
A0A2K2BVL8
CAP10 domain-containing protein.
  
     0.481
A0A2K2C123
LEA_2 domain-containing protein.
  
     0.476
POPTR_T165600
LEA_2 domain-containing protein.
  
     0.474
A9PBC0_POPTR
Uncharacterized protein.
  
     0.471
B9HPB3_POPTR
Uncharacterized protein.
  
     0.471
A0A2K1YDH3
C2H2-type domain-containing protein.
  
 
   0.467
POPTR_T054500
Uncharacterized protein.
  
     0.457
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.