STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9GQ08_POPTRCatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (492 aa)    
Predicted Functional Partners:
B9GXP7_POPTR
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.943
B9H2B3_POPTR
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.934
A0A3N7EPT1
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.933
A9PFI8_POPTR
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.933
B9GXP6_POPTR
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.933
B9I1W2_POPTR
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 
 0.933
A0A2K2AMB8
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 
0.900
B9H662_POPTR
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 
0.900
A0A2K2B3E2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.776
U5GTV8_POPTR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.776
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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