STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9GQL5_POPTRUncharacterized protein. (201 aa)    
Predicted Functional Partners:
A0A2K1Z4F2
Uncharacterized protein.
     
  0.540
A0A3N7EHH4
Uncharacterized protein.
     
  0.540
B9GQC6_POPTR
DAGKc domain-containing protein.
     
  0.540
B9I9R2_POPTR
Uncharacterized protein.
     
  0.540
B9HUV4_POPTR
PHD_Oberon domain-containing protein.
  
     0.502
A0A2K1ZE28
Uncharacterized protein; Belongs to the NPH3 family.
  
     0.469
A0A3N7EGT3
Uncharacterized protein.
  
     0.465
A9PES1_POPTR
Uncharacterized protein.
  
     0.461
B9MTT5_POPTR
Uncharacterized protein.
  
     0.456
B9N5V0_POPTR
Uncharacterized protein.
  
     0.453
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.