STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9H2Q4_POPTRUncharacterized protein. (234 aa)    
Predicted Functional Partners:
A0A2K2C6G8
Uncharacterized protein.
   
  
 0.666
A0A2K1X3G3
Uncharacterized protein.
   
  
 0.600
A0A3N7H8B6
DUF632 domain-containing protein.
  
 
 0.502
B9GQF5_POPTR
F-box domain-containing protein.
  
     0.484
B9I8S9_POPTR
F-box domain-containing protein.
  
     0.483
A9PH75_POPTR
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
 
 
 0.472
A0A2K1YMJ2
Bulb-type lectin domain-containing protein.
  
 
  0.471
A0A3N7F113
Uncharacterized protein.
  
  0.470
B9HRR7_POPTR
Uncharacterized protein.
  
  0.470
B9IM44_POPTR
Uncharacterized protein.
  
 
  0.470
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.