STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9H381_POPTRUncharacterized protein. (148 aa)    
Predicted Functional Partners:
A0A2K1XJG6
RNase III domain-containing protein.
  
     0.513
A0A2K2AP54
Uncharacterized protein.
  
     0.495
A0A3N7G6D1
Uncharacterized protein.
  
     0.485
POPTR_T101000
Uncharacterized protein.
  
     0.480
A0A2K2C6F7
Uncharacterized protein.
  
 
   0.479
U5G762_POPTR
Uncharacterized protein.
  
     0.472
B9HYU3_POPTR
Uncharacterized protein.
  
     0.464
A0A2K1ZTC6
Uncharacterized protein.
  
     0.445
B9GX42_POPTR
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.440
B9MXZ7_POPTR
Uncharacterized protein.
  
     0.438
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.