Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2K1YZV2 | B9HAT6_POPTR | A0A2K1YZV2 | B9HAT6 | Uncharacterized protein. | Uncharacterized protein. | 0.473 |
A0A2K2A5X7 | B9HAT6_POPTR | A0A2K2A5X7 | B9HAT6 | RING-type domain-containing protein. | Uncharacterized protein. | 0.473 |
A0A3N7G736 | B9HAT6_POPTR | A0A3N7G736 | B9HAT6 | RING-type domain-containing protein. | Uncharacterized protein. | 0.473 |
A9PBS4_POPTR | B9HAT6_POPTR | A9PBS4 | B9HAT6 | Uncharacterized protein. | Uncharacterized protein. | 0.414 |
A9PBS4_POPTR | LSM5 | A9PBS4 | A9PC96 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.456 |
A9PBS4_POPTR | LSM8 | A9PBS4 | A9PCH9 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.406 |
B9HAT6_POPTR | A0A2K1YZV2 | B9HAT6 | A0A2K1YZV2 | Uncharacterized protein. | Uncharacterized protein. | 0.473 |
B9HAT6_POPTR | A0A2K2A5X7 | B9HAT6 | A0A2K2A5X7 | Uncharacterized protein. | RING-type domain-containing protein. | 0.473 |
B9HAT6_POPTR | A0A3N7G736 | B9HAT6 | A0A3N7G736 | Uncharacterized protein. | RING-type domain-containing protein. | 0.473 |
B9HAT6_POPTR | A9PBS4_POPTR | B9HAT6 | A9PBS4 | Uncharacterized protein. | Uncharacterized protein. | 0.414 |
B9HAT6_POPTR | B9HJW8_POPTR | B9HAT6 | B9HJW8 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
B9HAT6_POPTR | B9HV66_POPTR | B9HAT6 | B9HV66 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
B9HAT6_POPTR | B9I3F7_POPTR | B9HAT6 | B9I3F7 | Uncharacterized protein. | Uncharacterized protein. | 0.563 |
B9HAT6_POPTR | LSM5 | B9HAT6 | A9PC96 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.408 |
B9HAT6_POPTR | LSM8 | B9HAT6 | A9PCH9 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.431 |
B9HAT6_POPTR | POPTR_T154700 | B9HAT6 | B9HVE7 | Uncharacterized protein. | Uncharacterized protein. | 0.473 |
B9HJW8_POPTR | B9HAT6_POPTR | B9HJW8 | B9HAT6 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
B9HV66_POPTR | B9HAT6_POPTR | B9HV66 | B9HAT6 | Uncharacterized protein. | Uncharacterized protein. | 0.472 |
B9I3F7_POPTR | B9HAT6_POPTR | B9I3F7 | B9HAT6 | Uncharacterized protein. | Uncharacterized protein. | 0.563 |
B9I3F7_POPTR | LSM5 | B9I3F7 | A9PC96 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.556 |
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