Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2K1XKF7 | A0A2K1Y8C0 | A0A2K1XKF7 | A0A2K1Y8C0 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.995 |
A0A2K1XKF7 | A0A2K2AYI8 | A0A2K1XKF7 | A0A2K2AYI8 | WD_REPEATS_REGION domain-containing protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.995 |
A0A2K1XKF7 | A0A2K2AZS5 | A0A2K1XKF7 | A0A2K2AZS5 | WD_REPEATS_REGION domain-containing protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.995 |
A0A2K1XKF7 | A9PEW5_POPTR | A0A2K1XKF7 | A9PEW5 | WD_REPEATS_REGION domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.989 |
A0A2K1XKF7 | B9GTN9_POPTR | A0A2K1XKF7 | B9GTN9 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.499 |
A0A2K1XKF7 | B9H7M9_POPTR | A0A2K1XKF7 | B9H7M9 | WD_REPEATS_REGION domain-containing protein. | U1-type domain-containing protein. | 0.499 |
A0A2K1XKF7 | B9I0W5_POPTR | A0A2K1XKF7 | B9I0W5 | WD_REPEATS_REGION domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.989 |
A0A2K1XKF7 | B9ICW5_POPTR | A0A2K1XKF7 | B9ICW5 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.994 |
A0A2K1XKF7 | B9IF35_POPTR | A0A2K1XKF7 | B9IF35 | WD_REPEATS_REGION domain-containing protein. | Brix domain-containing protein. | 0.983 |
A0A2K1XKF7 | EIF6-4 | A0A2K1XKF7 | B9HH19 | WD_REPEATS_REGION domain-containing protein. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. | 0.952 |
A0A2K1Y8C0 | A0A2K1XKF7 | A0A2K1Y8C0 | A0A2K1XKF7 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
A0A2K1Y8C0 | A0A2K2AYI8 | A0A2K1Y8C0 | A0A2K2AYI8 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.996 |
A0A2K1Y8C0 | A0A2K2AZS5 | A0A2K1Y8C0 | A0A2K2AZS5 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.996 |
A0A2K1Y8C0 | A9PEW5_POPTR | A0A2K1Y8C0 | A9PEW5 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.959 |
A0A2K1Y8C0 | B9GTN9_POPTR | A0A2K1Y8C0 | B9GTN9 | Uncharacterized protein. | Uncharacterized protein. | 0.603 |
A0A2K1Y8C0 | B9H7M9_POPTR | A0A2K1Y8C0 | B9H7M9 | Uncharacterized protein. | U1-type domain-containing protein. | 0.603 |
A0A2K1Y8C0 | B9I0W5_POPTR | A0A2K1Y8C0 | B9I0W5 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.959 |
A0A2K1Y8C0 | B9ICW5_POPTR | A0A2K1Y8C0 | B9ICW5 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
A0A2K1Y8C0 | B9IF35_POPTR | A0A2K1Y8C0 | B9IF35 | Uncharacterized protein. | Brix domain-containing protein. | 0.999 |
A0A2K1Y8C0 | EIF6-4 | A0A2K1Y8C0 | B9HH19 | Uncharacterized protein. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. | 0.960 |
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