STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9HUB8_POPTRC2H2-type domain-containing protein. (213 aa)    
Predicted Functional Partners:
B9HCY8_POPTR
BHLH family protein.
  
  
 0.664
B9IEW9_POPTR
LOB domain-containing protein.
  
   
 0.634
A0A2K1XBG6
C2H2-type domain-containing protein.
  
   
 0.600
B9NI62_POPTR
BHLH domain-containing protein.
  
  
 0.596
B9I7L5_POPTR
Uncharacterized protein.
    
 
 0.571
B9I3C8_POPTR
LOB domain-containing protein.
      
 0.556
B9N4Z9_POPTR
AP2/ERF domain-containing protein.
      
 0.556
FL
Floricaula/leafy homolog; Probable transcription factor.
      
 0.555
A0A2K2A4U1
C2H2-type domain-containing protein.
  
   
 0.553
A0A3N7FC37
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.553
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.