STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9HVA0_POPTRbPH_2 domain-containing protein. (199 aa)    
Predicted Functional Partners:
B9GRD0_POPTR
Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
  
    0.522
B9I6H1_POPTR
Uncharacterized protein.
  
    0.491
B9INV3_POPTR
Uncharacterized protein.
  
    0.478
B9HTN3_POPTR
PsbP domain-containing protein.
  
    0.476
U5G4C0_POPTR
NmrA domain-containing protein.
  
    0.465
B9H1Q6_POPTR
NmrA domain-containing protein.
  
    0.446
B9HJW7_POPTR
Uncharacterized protein.
  
    0.440
A9PGC7_POPTR
Uncharacterized protein.
  
    0.439
B9H3P8_POPTR
Uncharacterized protein.
  
    0.427
A9PHA9_POPTR
Uncharacterized protein.
  
    0.422
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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