STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9HVR6_POPTRGlutamine amidotransferase type-1 domain-containing protein. (276 aa)    
Predicted Functional Partners:
A0A2K1Z2N7
Uncharacterized protein.
 
 0.997
B9HSQ4_POPTR
Uncharacterized protein.
 
 0.997
A0A2K1YAT4
Uncharacterized protein.
 
 
 0.996
ICS
Isochorismate synthase.
 
 0.994
A0A2K1YTK7
MR_MLE domain-containing protein.
  
 0.993
A0A2K1YYF6
Glutamine amidotransferase type-1 domain-containing protein.
 
0.992
B9IAU9_POPTR
IGPS domain-containing protein.
 
 
 0.991
B9HLM0_POPTR
Chorismate synthase.
  
 
 0.980
B9HUE4_POPTR
Chorismate synthase.
  
 
 0.980
U5G1S0_POPTR
Chorismate_bind domain-containing protein.
 
 0.980
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.