Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2K2A1F2 | B9HZV6_POPTR | A0A2K2A1F2 | B9HZV6 | FAS1 domain-containing protein. | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | 0.716 |
A9P8F7_POPTR | B9HZV6_POPTR | A9P8F7 | B9HZV6 | FAS1 domain-containing protein. | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | 0.716 |
A9PC51_POPTR | B9GPA1_POPTR | A9PC51 | B9GPA1 | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.900 |
A9PC51_POPTR | B9HZV6_POPTR | A9PC51 | B9HZV6 | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | 0.613 |
B9GPA1_POPTR | A9PC51_POPTR | B9GPA1 | A9PC51 | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.900 |
B9GPA1_POPTR | B9HZV6_POPTR | B9GPA1 | B9HZV6 | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | 0.613 |
B9HZV6_POPTR | A0A2K2A1F2 | B9HZV6 | A0A2K2A1F2 | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | FAS1 domain-containing protein. | 0.716 |
B9HZV6_POPTR | A9P8F7_POPTR | B9HZV6 | A9P8F7 | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | FAS1 domain-containing protein. | 0.716 |
B9HZV6_POPTR | A9PC51_POPTR | B9HZV6 | A9PC51 | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.613 |
B9HZV6_POPTR | B9GPA1_POPTR | B9HZV6 | B9GPA1 | Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. | Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.613 |