STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9ID93_POPTRUncharacterized protein. (176 aa)    
Predicted Functional Partners:
B9II04_POPTR
Uncharacterized protein.
  
     0.500
A0A2K2A4K6
Uncharacterized protein.
  
     0.485
A9PIH1_POPTR
Uncharacterized protein.
  
     0.476
A0A2K1XPR6
Uncharacterized protein.
  
     0.465
B9H8X7_POPTR
NAC domain-containing protein.
  
     0.465
B9NGC6_POPTR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.461
B9N5H6_POPTR
NAC family protein.
  
     0.456
A0A3N7EIG9
Uncharacterized protein.
  
     0.445
B9GYA7_POPTR
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.445
U5FGL2_POPTR
Uncharacterized protein.
  
     0.441
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.