STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9IER7_POPTRCarbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (263 aa)    
Predicted Functional Partners:
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
     
 0.929
A0A2K1XRH1
TFCD_C domain-containing protein.
  
  
 0.767
U7E1R7_POPTR
Adenosine/AMP deaminase family protein.
      
 0.713
A0A2K2BG39
Uncharacterized protein.
  
 
 0.646
A0A3N7GFW8
Uncharacterized protein.
  
 
 0.646
U5GG96_POPTR
Uncharacterized protein.
  
 
 0.646
A0A2K2AKR5
Structural maintenance of chromosomes protein.
   
  
 0.635
A0A2K2C1U2
Exonuclease domain-containing protein.
      
 0.612
B9H657_POPTR
Phosphoserine aminotransferase.
      
 0.587
A0A2K2B949
Uncharacterized protein; Belongs to the heat shock protein 70 family.
     
 0.575
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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