STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9INI7_POPTRUncharacterized protein. (688 aa)    
Predicted Functional Partners:
A9PCK1_POPTR
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
  
 0.704
B9IIQ5_POPTR
M20_dimer domain-containing protein.
      
 0.628
A0A2K2A5H3
M20_dimer domain-containing protein.
      
 0.626
B9HBV9_POPTR
M20_dimer domain-containing protein.
      
 0.626
A0A2K1XFU6
M20_dimer domain-containing protein.
      
 0.619
A0A2K1YNC1
M20_dimer domain-containing protein.
      
 0.618
A9PG36_POPTR
M20_dimer domain-containing protein.
      
 0.618
B9IAS5_POPTR
Uncharacterized protein.
   
 
  0.608
A0A2K1XVD6
AAA domain-containing protein.
      
 0.575
A0A2K1YVJ1
AAA domain-containing protein.
      
 0.575
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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