STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNO1Nodulation Signaling Pathway 1 protein homologue 2; Belongs to the GRAS family. (562 aa)    
Predicted Functional Partners:
B9GUD3_POPTR
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
0.606
A0A2K2AI35
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
0.604
A0A2K2B4U4
Uncharacterized protein.
  
   
 0.601
A0A3N7FSQ1
Uncharacterized protein.
  
   
 0.599
A0A2K1Z0G7
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.573
B9I5B4_POPTR
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.553
B9IDR8_POPTR
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
      
 0.553
A0A2K1YQV9
STAS domain-containing protein.
      
 0.522
A0A2K1ZZN3
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
      
 0.521
A0A2K1X592
AP2/ERF domain-containing protein.
  
   
 0.512
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.