STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ90701.1Hypothetical protein. (447 aa)    
Predicted Functional Partners:
SFZ92014.1
Glycosyl hydrolase family 115.
     0.806
SFZ90867.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
     0.778
SFZ91853.1
Lysophospholipase L1.
 
  
  0.770
SFZ94367.1
WD40-like Beta Propeller Repeat.
  
    0.702
SFZ93873.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.693
SFZ91904.1
N-terminal ig-like domain of cellulase.
  
     0.597
SFZ90702.1
Uncharacterized radical SAM protein YgiQ.
 
     0.589
SFZ94368.1
Protein of unknown function.
  
     0.554
SFZ91907.1
Mannobiose 2-epimerase.
  
     0.547
SFZ92025.1
2-dehydro-3-deoxy-D-arabinonate dehydratase.
  
     0.486
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.