STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ89182.1Uncharacterised ACR, YkgG family COG1556. (202 aa)    
Predicted Functional Partners:
SFZ89185.1
Acyl-CoA-binding protein.
 
     0.879
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.814
SFZ89183.1
Phosphatidate cytidylyltransferase.
       0.808
SFZ91794.1
FAD/FMN-containing dehydrogenase.
  
 
 0.778
SFZ93611.1
D-lactate dehydrogenase.
  
 
 0.778
SFZ90047.1
Protein of unknown function.
  
     0.745
SFZ89178.1
Carbon monoxide dehydrogenase subunit G.
  
     0.714
SFZ91960.1
Hypothetical protein.
  
     0.713
SFZ93511.1
Hypothetical protein.
  
     0.709
SFZ94925.1
Gliding motility associated protien GldN.
  
     0.701
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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