STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ89475.1Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (854 aa)    
Predicted Functional Partners:
SFZ89476.1
Arylsulfatase A.
  0.730
SFZ93434.1
Alpha-galactosidase.
 
  
 0.669
SFZ94089.1
Beta-galactosidase.
  
  
 
0.641
SFZ94070.1
Alpha galactosidase A.
  
  
  0.640
SFZ89474.1
Arylsulfatase A.
  0.630
SFZ91790.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.619
SFZ92009.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.591
SFZ89477.1
Arylsulfatase A.
 
  0.567
SFZ92000.1
alpha-N-arabinofuranosidase.
  
  
  0.505
SFZ93555.1
Glucokinase.
     
 0.490
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.