STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ89626.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
SFZ91729.1
Hypothetical protein.
  
     0.769
SFZ92793.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
     0.754
SFZ90677.1
Biopolymer transport protein ExbD.
  
   0.751
SFZ90852.1
OmpA family protein.
   
 
 0.730
SFZ93872.1
Hypothetical protein.
  
     0.724
SFZ93782.1
Hypothetical protein.
  
   0.720
SFZ90094.1
Hypothetical protein.
  
     0.708
SFZ89595.1
Protein of unknown function.
  
     0.702
SFZ92692.1
Hypothetical protein.
  
   0.701
SFZ90675.1
Biopolymer transport protein ExbD.
  
   0.700
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.