Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFZ89784.1 | SFZ89785.1 | SAMN05428642_101560 | SAMN05428642_101561 | Catechol 2,3-dioxygenase. | Uncharacterized conserved protein. | 0.522 |
SFZ89784.1 | SFZ89787.1 | SAMN05428642_101560 | SAMN05428642_101562 | Catechol 2,3-dioxygenase. | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | 0.534 |
SFZ89784.1 | SFZ89789.1 | SAMN05428642_101560 | SAMN05428642_101563 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.522 |
SFZ89784.1 | SFZ89791.1 | SAMN05428642_101560 | SAMN05428642_101564 | Catechol 2,3-dioxygenase. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.526 |
SFZ89784.1 | uvrC | SAMN05428642_101560 | SAMN05428642_101559 | Catechol 2,3-dioxygenase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.543 |
SFZ89785.1 | SFZ89784.1 | SAMN05428642_101561 | SAMN05428642_101560 | Uncharacterized conserved protein. | Catechol 2,3-dioxygenase. | 0.522 |
SFZ89785.1 | SFZ89787.1 | SAMN05428642_101561 | SAMN05428642_101562 | Uncharacterized conserved protein. | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | 0.950 |
SFZ89785.1 | SFZ89789.1 | SAMN05428642_101561 | SAMN05428642_101563 | Uncharacterized conserved protein. | Hypothetical protein. | 0.952 |
SFZ89785.1 | SFZ89791.1 | SAMN05428642_101561 | SAMN05428642_101564 | Uncharacterized conserved protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.800 |
SFZ89785.1 | uvrC | SAMN05428642_101561 | SAMN05428642_101559 | Uncharacterized conserved protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.413 |
SFZ89787.1 | SFZ89784.1 | SAMN05428642_101562 | SAMN05428642_101560 | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | Catechol 2,3-dioxygenase. | 0.534 |
SFZ89787.1 | SFZ89785.1 | SAMN05428642_101562 | SAMN05428642_101561 | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | Uncharacterized conserved protein. | 0.950 |
SFZ89787.1 | SFZ89789.1 | SAMN05428642_101562 | SAMN05428642_101563 | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | Hypothetical protein. | 0.951 |
SFZ89787.1 | SFZ89791.1 | SAMN05428642_101562 | SAMN05428642_101564 | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.787 |
SFZ89789.1 | SFZ89784.1 | SAMN05428642_101563 | SAMN05428642_101560 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.522 |
SFZ89789.1 | SFZ89785.1 | SAMN05428642_101563 | SAMN05428642_101561 | Hypothetical protein. | Uncharacterized conserved protein. | 0.952 |
SFZ89789.1 | SFZ89787.1 | SAMN05428642_101563 | SAMN05428642_101562 | Hypothetical protein. | Ribosomal protein S6--L-glutamate ligase; Belongs to the RimK family. | 0.951 |
SFZ89789.1 | SFZ89791.1 | SAMN05428642_101563 | SAMN05428642_101564 | Hypothetical protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.801 |
SFZ89789.1 | uvrC | SAMN05428642_101563 | SAMN05428642_101559 | Hypothetical protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.413 |
SFZ89791.1 | SFZ89784.1 | SAMN05428642_101564 | SAMN05428642_101560 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Catechol 2,3-dioxygenase. | 0.526 |
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