STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ90116.1O-antigen ligase. (420 aa)    
Predicted Functional Partners:
SFZ90114.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SFZ90119.1
Hypothetical protein.
       0.773
SFZ90112.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
    0.604
SFZ90122.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.506
SFZ90125.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.484
SFZ89868.1
Hypothetical protein.
  
     0.461
SFZ91971.1
Hypothetical protein.
  
     0.456
SFZ90051.1
Glucose-1-phosphate thymidylyltransferase.
  
 
  0.455
SFZ89330.1
Peptidase family C25.
  
     0.436
SFZ90606.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.