STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ92845.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SFZ92847.1
Hypothetical protein.
 
     0.788
SFZ92849.1
Hypothetical protein.
       0.681
SFZ89309.1
Hypothetical protein.
  
     0.604
SFZ92843.1
Protein of unknown function.
 
     0.569
SFZ91014.1
Hypothetical protein.
  
     0.554
SFZ93511.1
Hypothetical protein.
  
     0.465
SFZ90375.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.453
SFZ90042.1
Sporulation related domain-containing protein.
  
     0.452
SFZ90035.1
Hypothetical protein.
  
     0.445
SFZ92842.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.431
Your Current Organism:
Flaviramulus basaltis
NCBI taxonomy Id: 369401
Other names: CIP 109091, DSM 18180, F. basaltis, Flaviramulus basaltis Einen and Ovreas 2006 emend. Zhang et al. 2013, strain H35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.